EC 2.7.7.6 - nucleoside- triphosphate:RNA nucleotidyltransferase (DNA- directed) (DNA- directed RNA polymerase)

3D structures of EC 2.7.7.6 - DNA-directed RNA polymerase in Protein Data Bank

updated: 17 May 2012, 1:59

1. 1a1d: Yeast Rna Polymerase Subunit Rpb8, Nmr, Minimized Average Structure, Alpha Carbons Only
2. 1aro: T7 Rna Polymerase Complexed with T7 Lysozyme
3. 1bdf: Structure of Escherichia Coli Rna Polymerase Alpha Subunit N-terminal Domain
4. 1cez: Crystal Structure of a T7 Rna Polymerase-t7 Promoter Complex
5. 1dzf: Rpb5 from S.cerevisiae
6. 1ef4: Solution Structure of The Essential Rna Polymerase Subunit Rpb10 from Methanobacterium Thermoautotrophicum
7. 1eik: Solution Structure of Rna Polymerase Subunit Rpb5 from Methanobacterium Thermoautotrophicum
8. 1go3: Structure of an Archeal Homolog of The Eukaryotic Rna Polymerase II Rpb4/rpb7 Complex
9. 1h38: Structure of a T7 Rna Polymerase Elongation Complex at 2.9a Resolution
10. 1hqm: Crystal Structure of Thermus Aquaticus Core Rna Polymerase- Includes Complete Structure with Side-chains (except for Disordered Regions)-further Refined from Original Deposition-contains Additional Sequence Information
11. 1i3q: Rna Polymerase II Crystal Form I at 3.1 a Resolution
12. 1i50: Rna Polymerase II Crystal Form II at 2.8 a Resolution
13. 1i6h: Rna Polymerase II Elongation Complex
14. 1i6v: Thermus Aquaticus Core Rna Polymerase-rifampicin Complex
15. 1iw7: Crystal Structure of The Rna Polymerase Holoenzyme from Thermus Thermophilus at 2.6a Resolution
16. 1k83: Crystal Structure of Yeast Rna Polymerase II Complexed with The Inhibitor Alpha Amanitin
17. 4rnp: Bacteriophage T7 Rna Polymerase, High Salt Crystal Form, Low Temperature Data, Alpha-carbons Only
18. 1l9u: Thermus Aquaticus Rna Polymerase Holoenzyme at 4 a Resolution
19. 1l9z: Thermus Aquaticus Rna Polymerase Holoenzyme/fork-junction Promoter Dna Complex at 6.5 a Resolution
20. 1lb2: Structure of The E. Coli Alpha C-terminal Domain of Rna Polymerase in Complex with Cap and Dna
21. 3nfi: Crystal Structure of Tandem Winged Helix Domain of Rna Polymerase I Subunit A49
22. 3nfh: Crystal Structure of Tandem Winged Helix Domain of Rna Polymerase I Subunit A49 (p4)
23. 3nfg: Crystal Structure of Dimerization Module of Rna Polymerase I Subcomplex A49/a34.5
24. 3nff: Crystal Structure of Extended Dimerization Module of Rna Polymerase I Subcomplex A49/a34.5
25. 3mlq: Crystal Structure of The Thermus Thermophilus Transcription-repair Coupling Factor Rna Polymerase Interacting Domain with The Thermus Aquaticus Rna Polymerase Beta1 Domain
26. 1msw: Structural Basis for The Transition from Initiation to Elongation Transcription in T7 Rna Polymerase
27. 3m4o: Rna Polymerase II Elongation Complex B
28. 3m3y: Rna Polymerase II Elongation Complex C
29. 3lu0: Molecular Model of Escherichia Coli Core Rna Polymerase
30. 3lti: Crystal Structure of The Escherichia Coli Rna Polymerase Beta Subunit Beta2-betai4 Domains
31. 3lpe: Crystal Structure of Spt4/5ngn Heterodimer Complex from Methanococcus Jannaschii
32. 1nik: Wild Type Rna Polymerase II
33. 1nt9: Complete 12-subunit Rna Polymerase II
34. 3k7a: Crystal Structure of an Rna Polymerase Ii-tfiib Complex
35. 3k4g: Crystal Structure of E. Coli Rna Polymerase Alpha Subunit C-terminal Domain
36. 3k1f: Crystal Structure of Rna Polymerase II in Complex with Tfiib
37. 3iyd: Three-dimensional Em Structure of an Intact Activator- Dependent Transcription Initiation Complex
38. 3ihq: Crystal Structure of Reduced C10S Spx in Complex with The Alpha C-terminal Domain of Rna Polymeras
39. 1pqv: Rna Polymerase Ii-tfiis Complex
40. 3i4n: 8-oxoguanine Containing Rna Polymerase II Elongation Complex E
41. 3i4m: 8-oxoguanine Containing Rna Polymerase II Elongation Complex D
42. 3hoz: Complete Rna Polymerase II Elongation Complex IV with a T-u Mismatch and a Frayed Rna 3'-guanine
43. 3hoy: Complete Rna Polymerase II Elongation Complex VI
44. 3hox: Complete Rna Polymerase II Elongation Complex V
45. 3how: Complete Rna Polymerase II Elongation Complex III with a T-u Mismatch and a Frayed Rna 3'-uridine
46. 3hov: Complete Rna Polymerase II Elongation Complex II
47. 3hou: Complete Rna Polymerase II Elongation Complex I with a T-u Mismatch
48. 1qkl: Hrpabc14.4, Essential Subunit of Human Rna Polymerases I, II and III
49. 1qln: Structure of a Transcribing T7 Rna Polymerase Initiation Complex
50. 3hkz: The X-ray Crystal Structure of Rna Polymerase from Archaea
51. 3h3v: Yeast Rnap II Containing Poly(a)-signal Sequence in The Active Site
52. 1r5u: Rna Polymerase II Tfiib Complex
53. 3h0g: Rna Polymerase II from Schizosaccharomyces Pombe
54. 1r9s: Rna Polymerase II Strand Separated Elongation Complex, Matched Nucleotide
55. 1r9t: Rna Polymerase II Strand Separated Elongation Complex, Mismatched Nucleotide
56. 3gtq: Backtracked Rna Polymerase II Complex Induced by Damage
57. 3gtp: Backtracked Rna Polymerase II Complex with 24mer Rna
58. 3gto: Backtracked Rna Polymerase II Complex with 15mer Rna
59. 3gtm: Co-complex of Backtracked Rna Polymerase II with Tfiis
60. 3gtl: Backtracked Rna Polymerase II Complex with 13mer with G<>u Mismatch
61. 3gtk: Backtracked Rna Polymerase II Complex with 18mer Rna
62. 3gtj: Backtracked Rna Polymerase II Complex with 13mer Rna
63. 3gtg: Backtracked Rna Polymerase II Complex with 12mer Rna
64. 3gfk: Crystal Structure of Bacillus Subtilis Spx/rna Polymerase Alpha Subunit C-terminal Domain Complex
65. 1s0v: Structural Basis for Substrate Selection by T7 Rna Polymerase
66. 1s76: T7 Rna Polymerase Alpha Beta Methylene Atp Elongation Complex
67. 1s77: T7 Rnap Product Pyrophosphate Elongation Complex
68. 1sfo: Rna Polymerase II Strand Separated Elongation Complex
69. 3fki: 12-subunit Rna Polymerase II Refined with Zn-sad Data
70. 1smy: Structural Basis for Transcription Regulation by Alarmone Ppgpp
71. 3eql: Crystal Structure of The T. Thermophilus Rna Polymerase Holoenzyme in Complex with Antibiotic Myxopyronin
72. 3e7h: The Crystal Structure of The Beta Subunit of The Dna- Directed Rna Polymerase from Vibrio Cholerae O1 Biovar Eltor
73. 3e3j: Crystal Structure of an Intermediate Complex of T7 Rnap and 8nt of Rna
74. 3e2e: Crystal Structure of an Intermediate Complex of T7 Rnap and 7nt of Rna
75. 1twa: Rna Polymerase II Complexed with Atp
76. 1twc: Rna Polymerase II Complexed with Gtp
77. 1twf: Rna Polymerase II Complexed with Utp at 2.3 a Resolution
78. 1twg: Rna Polymerase II Complexed with Ctp
79. 1twh: Rna Polymerase II Complexed with 2'datp
80. 3dxj: Crystal Structure of Thermus Thermophilus Rna Polymerase Holoenzyme in Complex with The Antibiotic Myxopyronin
81. 3cqz: Crystal Structure of 10 Subunit Rna Polymerase II in Complex with The Inhibitor Alpha-amanitin
82. 3c46: X-ray Crystal Structure of The N4 Mini-vrnap P2_7a Promoter Complex Soaked with Mgcl2
83. 3c3l: X-ray Crystal Structure of The N4 Mini-vrnap P2 Promoter Complex
84. 3c2p: X-ray Crystal Structure of The N4 Mini-vrnap P1 Promoter Complex
85. 1wcm: Complete 12-subunit Rna Polymerase II at 3.8 Ang
86. 2yu9: Rna Polymerase II Elongation Complex in 150 Mm Mg+2 with Utp
87. 1xpp: Crystal Structure of Ta1416,dna-directed Rna Polymerase Subunit L, from Thermoplasma Acidophilum
88. 1xs9: A Model of The Ternary Complex Formed between Mara, The Alpha-ctd of Rna Polymerase and Dna
89. 1y14: Crystal Structure of Yeast Subcomplex of Rpb4 and Rpb7
90. 1y1v: Refined Rna Polymerase Ii-tfiis Complex
91. 1y1w: Complete Rna Polymerase II Elongation Complex
92. 1y1y: Rna Polymerase Ii-tfiis-dna/rna Complex
93. 1y77: Complete Rna Polymerase II Elongation Complex with Substrate Analogue Gmpcpp
94. 1ynj: Taq Rna Polymerase-sorangicin Complex
95. 1ynn: Taq Rna Polymerase-rifampicin Complex
96. 1z3e: Crystal Structure of Spx in Complex with The C-terminal Domain of The Rna Polymerase Alpha Subunit
97. 2vum: Alpha-amanitin Inhibited Complete Rna Polymerase II Elongation Complex
98. 1zyr: Structure of Thermus Thermophilus Rna Polymerase Holoenzyme in Complex with The Antibiotic Streptolydigin
99. 2a68: Crystal Structure of The T. Thermophilus Rna Polymerase Holoenzyme in Complex with Antibiotic Rifabutin
100. 2a69: Crystal Structure of The T. Thermophilus Rna Polymerase Holoenzyme in Complex with Antibiotic Rifapentin
101. 2a6e: Crystal Structure of The T. Thermophilus Rna Polymerase Holoenzyme
102. 2a6h: Crystal Structure of The T. Thermophilus Rna Polymerase Holoenzyme in Complex with Antibiotic Sterptolydigin
103. 2auj: Structure of Thermus Aquaticus Rna Polymerase Beta'-subunit Insert
104. 2auk: Structure of E. Coli Rna Polymerase Beta' G/g' Insert
105. 2b63: Complete Rna Polymerase Ii-rna Inhibitor Complex
106. 2b8k: 12-subunit Rna Polymerase II
107. 2be5: Crystal Structure of The T. Thermophilus Rna Polymerase Holoenzyme in Complex with Inhibitor Tagetitoxin
108. 2rf4: Crystal Structure of The Rna Polymerase I Subcomplex A14/43
109. 2r93: Elongation Complex of Rna Polymerase II with a Hepatitis Delta Virus-derived Rna Stem Loop
110. 2r92: Elongation Complex of Rna Polymerase II with Artificial Rdrp Scaffold
111. 2r7z: Cisplatin Lesion Containing Rna Polymerase II Elongation Complex
112. 2c35: Subunits Rpb4 and Rpb7 of Human Rna Polymerase II
113. 2ckz: X-ray Structure of Rna Polymerase III Subcomplex C17-c25.
114. 2cw0: Crystal Structure of Thermus Thermophilus Rna Polymerase Holoenzyme at 3.3 Angstroms Resolution
115. 2ppb: Crystal Structure of The T. Thermophilus Rnap Polymerase Elongation Complex with The Ntp Substrate Analog and Antibiotic Streptolydigin
116. 2po4: X-ray Crystal Structure of Polymerase Domain of The Bacteriophage N4 Virion Rna Polymerase
117. 2pmz: Archaeal Rna Polymerase from Sulfolobus Solfataricus
118. 2pi5: T7 Rna Polymerase Complexed with a Phi10 Promoter
119. 2pi4: T7RNAP Complexed with a Phi10 Protein and Initiating Gtps.
120. 2pa8: X-ray Crystal Structure of The D/l Subcomplex of The Sulfolobus Solfataricus Rna Polymerase
121. 2dk5: Solution Structure of Winged-helix Domain in Rna Polymerase III 39kda Polypeptide
122. 2dk8: Solution Structure of Rpc34 Subunit in Rna Polymerase III from Mouse
123. 2o5j: Crystal Structure of The T. Thermophilus Rnap Polymerase Elongation Complex with The Ntp Substrate Analog
124. 2o5i: Crystal Structure of The T. Thermophilus Rna Polymerase Elongation Complex
125. 2e2h: Rna Polymerase II Elongation Complex at 5 Mm Mg2+ with Gtp
126. 2e2i: Rna Polymerase II Elongation Complex in 5 Mm Mg+2 with 2'- Dgtp
127. 2e2j: Rna Polymerase II Elongation Complex in 5 Mm Mg+2 with Gmpcpp
128. 2nvz: Rna Polymerase II Elongation Complex with Utp, Updated 11/2006
129. 2nvy: Rna Polymerase II Form II in 150 Mm Mn+2
130. 2nvx: Rna Polymerase II Elongation Complex in 5 Mm Mg+2 with 2'- Dutp
131. 2nvt: Rna Polymerase II Elongation Complex in 150 Mm Mg+2 with Gmpcpp
132. 2nvq: Rna Polymerase II Elongation Complex in 150 Mm Mg+2 with 2'dutp
133. 2f3i: Solution Structure of a Subunit of Rna Polymerase II
134. 2gho: Recombinant Thermus Aquaticus Rna Polymerase for Structural Studies
135. 2ghq: Ctd-specific Phosphatase Scp1 in Complex with Peptide C- Terminal Domain of Rna Polymerase II
136. 2ght: Ctd-specific Phosphatase Scp1 in Complex with Peptide from C-terminal Domain of Rna Polymerase II
137. 2ja5: Cpd Lesion Containing Rna Polymerase II Elongation Complex a
138. 2ja6: Cpd Lesion Containing Rna Polymerase II Elongation Complex B
139. 2ja7: Cpd Lesion Containing Rna Polymerase II Elongation Complex C
140. 2ja8: Cpd Lesion Containing Rna Polymerase II Elongation Complex D
141. 2jzb: Solution Structure of The Complex between E.coli Nusa-ar2 and Rnap-actd
142. 3aoh: Rna Polymerase-gfh1 Complex (crystal Type 1)
143. 3aoi: Rna Polymerase-gfh1 Complex (crystal Type 2)
144. 2y0s: Crystal Structure of Sulfolobus Shibatae Rna Polymerase in P21 Space Group
145. 3po2: Arrested Rna Polymerase II Elongation Complex
146. 3po3: Arrested Rna Polymerase II Reactivation Intermediate
147. 3q22: X-ray Crystal Structure of The N4 Mini-vrnap and P2_7a Promoter Transcription Initiation Complex with Gtp and Magnesium: Substrate Complex I
148. 3q23: X-ray Crystal Structure of The N4 Mini-vrnap and P2_7a Promoter Transcription Initiation Complex with Gmpcpp and Manganese: Sustrate Complex II
149. 3q24: X-ray Crystal Structure of The N4 Mini-vrnap and P2_7a Promoter Transcription Initiation Complex with Pppgpg and Pyrophosphate: Product Complex
150. 3qt1: Rna Polymerase II Variant Containing a Chimeric Rpb9-c11 Subunit
151. 3n4m: E. Coli Rna Polymerase Alpha Subunit C-terminal Domain in Complex with Cap and Dna
152. 3n97: Rna Polymerase Alpha C-terminal Domain (e. Coli) and Sigma Region 4 (t. Aq. Mutant) Bound to (up,-35 Element) Dna
153. 3rzd: Rna Polymerase II Initiation Complex with a 5-nt Rna
154. 3rzo: Rna Polymerase II Initiation Complex with a 4-nt Rna
155. 3s14: Rna Polymerase II Initiation Complex with a 6-nt Rna
156. 3s15: Rna Polymerase II Initiation Complex with a 7-nt Rna
157. 3s16: Rna Polymerase II Initiation Complex with an 8-nt Rna
158. 3s17: Rna Polymerase II Initiation Complex with a 9-nt Rna
159. 3s1m: Rna Polymerase II Initiation Complex with a 5-nt Rna (variant 1)
160. 3s1n: Rna Polymerase II Initiation Complex with a 5-nt Rna (variant 2)
161. 3s1q: Rna Polymerase II Initiation Complex with a 5-nt 3'-deoxy Rna Soaked with Atp
162. 3s1r: Rna Polymerase II Initiation Complex with a 5-nt 3'-deoxy Rna Soaked with Gtp
163. 3s2d: Rna Polymerase II Initiation Complex with a 5-nt Rna Containing a 5br- U
164. 3s2h: Rna Polymerase II Initiation Complex with a 6-nt Rna Containing a 2[prime]-iodo Atp
165. 3t72: Phob(e)-sigma70(4)-(rnap-betha-flap-tip-helix)-dna Transcription Activation Sub-complex
166. 3tqy: Structure of a Single-stranded Dna-binding Protein (ssb), from Coxiella Burnetii
167. 3spa: Crystal Structure of Human Mitochondrial Rna Polymerase
168. 3j0k: Orientation of Rna Polymerase II within The Human Activator-bound Mediator-pol Ii-tfiif Assembly
169. 4a3c: Rna Polymerase II Initial Transcribing Complex with a 5nt Dna-rna Hybrid
170. 3tbi: Crystal Structure of T4 Gp33 Bound to E. Coli Rnap Beta-flap Domain
171. 4a3b: Rna Polymerase II Initial Transcribing Complex with a 4nt Dna-rna Hybrid
172. 4a3d: Rna Polymerase II Initial Transcribing Complex with a 6nt Dna-rna Hybrid
173. 4a3e: Rna Polymerase II Initial Transcribing Complex with a 5nt Dna-rna Hybrid and Soaked with Ampcpp
174. 4a3f: Rna Polymerase II Initial Transcribing Complex with a 6nt Dna-rna Hybrid and Soaked with Ampcpp
175. 4a3j: Rna Polymerase II Initial Transcribing Complex with a 2nt Dna-rna Hybrid and Soaked with Gmpcpp
176. 4a3k: Rna Polymerase II Initial Transcribing Complex with a 7nt Dna-rna Hybrid
177. 4a3l: Rna Polymerase II Initial Transcribing Complex with a 7nt Dna-rna Hybrid and Soaked with Ampcpp
178. 4a3m: Rna Polymerase II Initial Transcribing Complex with a 4nt Dna-rna Hybrid and Soaked with Ampcpp
179. 3qhq: Structure of Crispr-associated Protein Csn2
180. 4a3g: Rna Polymerase II Initial Transcribing Complex with a 2nt Dna-rna Hybrid
181. 4a3i: Rna Polymerase II Binary Complex with Dna
182. 2lmc: Structure of T7 Transcription Factor Gp2-e. Coli Rnap Jaw Domain Complex
183. 4a93: Rna Polymerase II Elongation Complex Containing a Cpd Lesion